CDLC Symposiums | Center for Chemical Dynamics in Living Cells

Initiative for Cell-Chemical Dynamics

Date: January 23rd – 24th, 2017
Location: Chung-Ang University, Seoul Campus, Building 310, Room B5 502

Initiative-of-Cell-Chemistry-Dynamics-Program.pdf

Topics and Speakers

Perspectives on the Diffusion-Influenced Biomolecular Reaction Kinetics
Sangyoub Lee, Department of Chemistry, Seoul National University

Surmounting the “Insurmountable” in Biophysical/Chemical Complexes
Wokyung Sung, Department of Physics, POSTech and IBS Center for Self-Assembly and Complexity

Consistency in Density Functional Calculations
Eunji Sim, Department of Chemistry, Yonsei University

Introduction to Statistical Mechanics of Phase Transitions
YounJoon Jung, Department of Chemistry, Seoul National University

A (Brief) Introduction to Challenges in Molecular Simulations for Polymeric Systems: Microfibers and Loop Formation Kinetics as examples
SeulKi Kwon, Hyun Woo Cho, and Bong June Sung, Department of Chemistry, Sogang University

Quantifying Anomalous Transport in Living Cells: From Subdiffusion to Superdiffusion
Jae-Hyung Jeon, Department of Physics, Pohang University of Science and Technology

Chemical Fluctuation Theorem for Stochastic Gene Expression
Ji-Hyun Kim, Department of Chemistry, Center for Chemical Dynamics in Living Cells

Translational and Rotational Decoupling Using Tracers of Locally Favorable Structures in Glass-Forming Liquids
Yoonjae Park  and Bong June Sung, Department of Chemistry, Sogang University

Study of Glassy Systems with both Static and Dynamic Interactions in the Trajectory Space
Chanwoo Noh and YounJoon Jung, Department of Chemistry, Seoul National University

Prediction of Chlorosulfolipid (Danicalipin A) Membrane Structure Using Combined Coarse-Grained and Atomistic Model Simulations
Junyeal Lee and Rakwoo Chang, Department of Chemistry, Kwangwoon University

How to Obtain Accurate Adiabatic Energy Gap of Transition Metal Complexes
Suhwan Song and Eunji Sim, Deparment of Chemistry, Yonsei University

Scaling Law for Irreducible Entropy Production in Critical Systems
Junghyo Jo, Department of Physics, Asia Pacific Center for Theoretical Physics

Chemical Fluctuation and Reaction Dynamics of Single Enzymes at Mesoscopic Concentrations
In-Chun Jeong, Sanggeun Song, Daehyun Kim, Seong Jun Park, Ji-Hyun Kim, and Jaeyoung Sung, Department of Chemistry, Center for Chemical Dynamics in Living Cells

Statistical Thermodynamics for Small Chemical Systems

Date: March 21st, 2018
Location: Chung-Ang University, Seoul Campus, Building 310, Room B1F 119

Statistical-thermodynamics-for-small-chemical-systems-program.pdf

Topics and Speakers

Phase Transitions of Confined Water: Theory and Simulation Studies
Joonkyung Jang, Department of Nanoenergy Engineering, Pusan National University

Exploring Interactions of Proteins and Surfactants with Biological Interfaces
Hyunseok Hwang, Department of Chemistry, Kangwon National University

Inhibition Mechanism of TEX14 in Cell Division: Well-Tempered Metadynamics
Yunju Cho and Rakwoo Chang, Department of Chemistry, Kwangwoon University

Excited State Energy Fluctuations in the Fenna-Matthews-Olson Complex: Distinction between Static andDynamic Disorder through Molecular Dynamics Simulations
Young Min Rhee, Department of Chemistry, Korea Advanced Institute of Science and Technology

In Silico Exploration of New Molecular Systems
Jun Soo Kim, Department of Chemistry and Nanoscience, Ewha Womans Unviersity

Handling Hidden yet Vital Factors: Novel Stochastic Kinetics for Complex Systems
Ji-Hyun Kim, Department of Chemistry, Center for Chemical Dynamics in Living Cells

Single Molecule Biophysics and Chemical Dynamics in Living Cells

Date: June 4th, 2018
Location: Chung-Ang University, Seoul Campus, Building 310, Room B1F 119

Single-molecule-biophysics-and-chemical-dynamics-in-living-cells.pdf

Topics and Speakers

Single-molecule Chemistry: from Transcription Regulation to Living Polymerization
Peng Chen, Department of Chemistry and Chemical Biology, Cornell University

Upconversion Nanoparticles (UCNP): From Fundamental Physical Chemistry to Biological Applications
Kang Taek Lee, Department of Chemistry, Gwangju Institute of Science and Technology

Activity-Dependent RNA Dynamics in Live Neurons Studied at Single Molecule Resolution
Hye Yoon Park, Department of Physics and Astronomy, Seoul National University

Correlating Transcription Initiation and Conformational Changes by a Single Subunit RNA Polymerase with near base pair Resolution
Hye Ran Koh, Department of Chemistry, Center for Chemical Dynamics in Living Cells

Novel Stochastic Kinetics for Quantitative Biology
Ji-Hyun Kim, Department of Chemistry, Center for Chemical Dynamics in Living Cell

Nonclassical Dynamics in Materials and Biological Systems

Date: June 4th, 2018
Location: Chung-Ang University, Seoul Campus, Building 310, Room B1F 119

Topics and Speakers

Dynamics and noises in biology
Chao-Ping Hsu, Institute of Chemistry, Academia Sinica

Entropy Determines the Mechanical Properties of Thermoplastic Elastomers
Bong June Sung, Department of Chemistry, Sogang University

Accelerating First-Principle Exploration on Potential Energy Landscape of Bio-molecules
Jer-Lai Kuo, IAMS, Academia Sinica

Simulating Ground-State Electronic Structure and X-ray Spectra of Transition Metal Clusters
Seunghoon Lee, Department of Chemistry, Seoul National University